Alteration of microbial communities colonizing leaf litter in a temperate woodland stream by growth of trees under conditions of elevated atmospheric CO2.
Identifieur interne : 003381 ( Main/Exploration ); précédent : 003380; suivant : 003382Alteration of microbial communities colonizing leaf litter in a temperate woodland stream by growth of trees under conditions of elevated atmospheric CO2.
Auteurs : John J. Kelly [États-Unis] ; Amit Bansal ; Jonathan Winkelman ; Lori R. Janus ; Shannon Hell ; Marie Wencel ; Patricia Belt ; Kevin A. Kuehn ; Steven T. Rier ; Nancy C. TuchmanSource :
- Applied and environmental microbiology [ 1098-5336 ] ; 2010.
Descripteurs français
- KwdFr :
- ADN bactérien (composition chimique), ADN bactérien (génétique), ADN fongique (composition chimique), ADN fongique (génétique), ADN ribosomique (composition chimique), ADN ribosomique (génétique), ARN bactérien (génétique), ARN ribosomique 16S (génétique), Acer (croissance et développement), Analyse de séquence d'ADN (MeSH), Arbres (croissance et développement), Bactéries (classification), Bactéries (croissance et développement), Bactéries (génétique), Biodiversité (MeSH), Champignons (classification), Champignons (croissance et développement), Champignons (génétique), Dioxyde de carbone (métabolisme), Données de séquences moléculaires (MeSH), Espaceur de l'ADN ribosomique (composition chimique), Espaceur de l'ADN ribosomique (génétique), Feuilles de plante (microbiologie), Gènes d'ARN ribosomique (MeSH), Populus (croissance et développement), Rivières (microbiologie), Salix (croissance et développement).
- MESH :
- composition chimique : ADN bactérien, ADN fongique, ADN ribosomique, Bactéries, Champignons, Espaceur de l'ADN ribosomique.
- croissance et développement : Acer, Arbres, Bactéries, Champignons, Populus, Salix.
- génétique : ADN bactérien, ADN fongique, ADN ribosomique, ARN bactérien, ARN ribosomique 16S, Bactéries, Champignons, Espaceur de l'ADN ribosomique.
- microbiologie : Feuilles de plante, Rivières.
- métabolisme : Dioxyde de carbone.
- Analyse de séquence d'ADN, Biodiversité, Données de séquences moléculaires, Gènes d'ARN ribosomique.
English descriptors
- KwdEn :
- Acer (growth & development), Bacteria (classification), Bacteria (genetics), Bacteria (growth & development), Biodiversity (MeSH), Carbon Dioxide (metabolism), DNA, Bacterial (chemistry), DNA, Bacterial (genetics), DNA, Fungal (chemistry), DNA, Fungal (genetics), DNA, Ribosomal (chemistry), DNA, Ribosomal (genetics), DNA, Ribosomal Spacer (chemistry), DNA, Ribosomal Spacer (genetics), Fungi (classification), Fungi (genetics), Fungi (growth & development), Genes, rRNA (MeSH), Molecular Sequence Data (MeSH), Plant Leaves (microbiology), Populus (growth & development), RNA, Bacterial (genetics), RNA, Ribosomal, 16S (genetics), Rivers (microbiology), Salix (growth & development), Sequence Analysis, DNA (MeSH), Trees (growth & development).
- MESH :
- chemical , chemistry : DNA, Bacterial, DNA, Fungal, DNA, Ribosomal, DNA, Ribosomal Spacer.
- chemical , genetics : DNA, Bacterial, DNA, Fungal, DNA, Ribosomal, DNA, Ribosomal Spacer, RNA, Bacterial, RNA, Ribosomal, 16S.
- chemical , metabolism : Carbon Dioxide.
- classification : Bacteria, Fungi.
- genetics : Bacteria, Fungi.
- growth & development : Acer, Bacteria, Fungi, Populus, Salix, Trees.
- microbiology : Plant Leaves, Rivers.
- Biodiversity, Genes, rRNA, Molecular Sequence Data, Sequence Analysis, DNA.
Abstract
Elevated atmospheric CO(2) can cause increased carbon fixation and altered foliar chemical composition in a variety of plants, which has the potential to impact forested headwater streams because they are detritus-based ecosystems that rely on leaf litter as their primary source of organic carbon. Fungi and bacteria play key roles in the entry of terrestrial carbon into aquatic food webs, as they decompose leaf litter and serve as a source of nutrition for invertebrate consumers. This study tested the hypothesis that changes in leaf chemistry caused by elevated atmospheric CO(2) would result in changes in the size and composition of microbial communities colonizing leaves in a woodland stream. Three tree species, Populus tremuloides, Salix alba, and Acer saccharum, were grown under ambient (360 ppm) or elevated (720 ppm) CO(2), and their leaves were incubated in a woodland stream. Elevated-CO(2) treatment resulted in significant increases in the phenolic and tannin contents and C/N ratios of leaves. Microbial effects, which occurred only for P. tremuloides leaves, included decreased fungal biomass and decreased bacterial counts. Analysis of fungal and bacterial communities on P. tremuloides leaves via terminal restriction fragment length polymorphism (T-RFLP) and clone library sequencing revealed that fungal community composition was mostly unchanged by the elevated-CO(2) treatment, whereas bacterial communities showed a significant shift in composition and a significant increase in diversity. Specific changes in bacterial communities included increased numbers of alphaproteobacterial and cytophaga-flavobacter-bacteroides (CFB) group sequences and decreased numbers of betaproteobacterial and firmicutes sequences, as well as a pronounced decrease in overall gram-positive bacterial sequences.
DOI: 10.1128/AEM.00221-10
PubMed: 20543045
PubMed Central: PMC2916475
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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(MeSH)</term><term>Molecular Sequence Data (MeSH)</term><term>Plant Leaves (microbiology)</term><term>Populus (growth & development)</term><term>RNA, Bacterial (genetics)</term><term>RNA, Ribosomal, 16S (genetics)</term><term>Rivers (microbiology)</term><term>Salix (growth & development)</term><term>Sequence Analysis, DNA (MeSH)</term><term>Trees (growth & development)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien (composition chimique)</term><term>ADN bactérien (génétique)</term><term>ADN fongique (composition chimique)</term><term>ADN fongique (génétique)</term><term>ADN ribosomique (composition chimique)</term><term>ADN ribosomique (génétique)</term><term>ARN bactérien (génétique)</term><term>ARN ribosomique 16S (génétique)</term><term>Acer (croissance et développement)</term><term>Analyse de séquence d'ADN (MeSH)</term><term>Arbres (croissance et développement)</term><term>Bactéries (classification)</term><term>Bactéries (croissance et 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xml:lang="fr"><term>Analyse de séquence d'ADN</term><term>Biodiversité</term><term>Données de séquences moléculaires</term><term>Gènes d'ARN ribosomique</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Elevated atmospheric CO(2) can cause increased carbon fixation and altered foliar chemical composition in a variety of plants, which has the potential to impact forested headwater streams because they are detritus-based ecosystems that rely on leaf litter as their primary source of organic carbon. Fungi and bacteria play key roles in the entry of terrestrial carbon into aquatic food webs, as they decompose leaf litter and serve as a source of nutrition for invertebrate consumers. This study tested the hypothesis that changes in leaf chemistry caused by elevated atmospheric CO(2) would result in changes in the size and composition of microbial communities colonizing leaves in a woodland stream. Three tree species, Populus tremuloides, Salix alba, and Acer saccharum, were grown under ambient (360 ppm) or elevated (720 ppm) CO(2), and their leaves were incubated in a woodland stream. Elevated-CO(2) treatment resulted in significant increases in the phenolic and tannin contents and C/N ratios of leaves. Microbial effects, which occurred only for P. tremuloides leaves, included decreased fungal biomass and decreased bacterial counts. Analysis of fungal and bacterial communities on P. tremuloides leaves via terminal restriction fragment length polymorphism (T-RFLP) and clone library sequencing revealed that fungal community composition was mostly unchanged by the elevated-CO(2) treatment, whereas bacterial communities showed a significant shift in composition and a significant increase in diversity. Specific changes in bacterial communities included increased numbers of alphaproteobacterial and cytophaga-flavobacter-bacteroides (CFB) group sequences and decreased numbers of betaproteobacterial and firmicutes sequences, as well as a pronounced decrease in overall gram-positive bacterial sequences.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">20543045</PMID><DateCompleted><Year>2010</Year><Month>11</Month><Day>01</Day></DateCompleted><DateRevised><Year>2019</Year><Month>01</Month><Day>08</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1098-5336</ISSN><JournalIssue CitedMedium="Internet"><Volume>76</Volume><Issue>15</Issue><PubDate><Year>2010</Year><Month>Aug</Month></PubDate></JournalIssue><Title>Applied and environmental microbiology</Title><ISOAbbreviation>Appl Environ Microbiol</ISOAbbreviation></Journal><ArticleTitle>Alteration of microbial communities colonizing leaf litter in a temperate woodland stream by growth of trees under conditions of elevated atmospheric CO2.</ArticleTitle><Pagination><MedlinePgn>4950-9</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1128/AEM.00221-10</ELocationID><Abstract><AbstractText>Elevated atmospheric CO(2) can cause increased carbon fixation and altered foliar chemical composition in a variety of plants, which has the potential to impact forested headwater streams because they are detritus-based ecosystems that rely on leaf litter as their primary source of organic carbon. Fungi and bacteria play key roles in the entry of terrestrial carbon into aquatic food webs, as they decompose leaf litter and serve as a source of nutrition for invertebrate consumers. This study tested the hypothesis that changes in leaf chemistry caused by elevated atmospheric CO(2) would result in changes in the size and composition of microbial communities colonizing leaves in a woodland stream. Three tree species, Populus tremuloides, Salix alba, and Acer saccharum, were grown under ambient (360 ppm) or elevated (720 ppm) CO(2), and their leaves were incubated in a woodland stream. Elevated-CO(2) treatment resulted in significant increases in the phenolic and tannin contents and C/N ratios of leaves. Microbial effects, which occurred only for P. tremuloides leaves, included decreased fungal biomass and decreased bacterial counts. Analysis of fungal and bacterial communities on P. tremuloides leaves via terminal restriction fragment length polymorphism (T-RFLP) and clone library sequencing revealed that fungal community composition was mostly unchanged by the elevated-CO(2) treatment, whereas bacterial communities showed a significant shift in composition and a significant increase in diversity. Specific changes in bacterial communities included increased numbers of alphaproteobacterial and cytophaga-flavobacter-bacteroides (CFB) group sequences and decreased numbers of betaproteobacterial and firmicutes sequences, as well as a pronounced decrease in overall gram-positive bacterial sequences.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Kelly</LastName><ForeName>John J</ForeName><Initials>JJ</Initials><AffiliationInfo><Affiliation>Department of Biology, Loyola University Chicago, 1032 West Sheridan Road, Chicago, IL 60660, USA. jkelly7@luc.edu</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bansal</LastName><ForeName>Amit</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Winkelman</LastName><ForeName>Jonathan</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Janus</LastName><ForeName>Lori R</ForeName><Initials>LR</Initials></Author><Author 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Janus</name><name sortKey="Kuehn, Kevin A" sort="Kuehn, Kevin A" uniqKey="Kuehn K" first="Kevin A" last="Kuehn">Kevin A. Kuehn</name><name sortKey="Rier, Steven T" sort="Rier, Steven T" uniqKey="Rier S" first="Steven T" last="Rier">Steven T. Rier</name><name sortKey="Tuchman, Nancy C" sort="Tuchman, Nancy C" uniqKey="Tuchman N" first="Nancy C" last="Tuchman">Nancy C. Tuchman</name><name sortKey="Wencel, Marie" sort="Wencel, Marie" uniqKey="Wencel M" first="Marie" last="Wencel">Marie Wencel</name><name sortKey="Winkelman, Jonathan" sort="Winkelman, Jonathan" uniqKey="Winkelman J" first="Jonathan" last="Winkelman">Jonathan Winkelman</name></noCountry><country name="États-Unis"><region name="Illinois"><name sortKey="Kelly, John J" sort="Kelly, John J" uniqKey="Kelly J" first="John J" last="Kelly">John J. Kelly</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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